##gff-version 3
#species: Drosophila pseudoobscura
#assembly-id: CAF1
#annotation-group: MAKA (see Mount, Gotea, Lin, Hernandez and Makalowski. 2007. "Spliceosomal small nuclear RNA genes in 11 insect genomes." RNA 13:5-14.)
#algorithm: SPR (SPliceosomal RNA; BLASTN 2.2.10 + MFOLD 3.1.2 + manual)
#authors: smount@umd.edu, vgotea@psu.edu, cxl46@psu.edu, wojtek@psu.edu
dpserec_scaffold_2499	blastn+mfold+man	snRNA	1154067	1154231	.	-	.	ID=Dpse\GA_MAKA_SPR_26000219;Name=snRNA:U1:1
dpserec_scaffold_2642	blastn+mfold+man	snRNA	6693351	6693514	.	-	.	ID=Dpse\GA_MAKA_SPR_26000220;Name=snRNA:U1:2
dpserec_scaffold_2642	blastn+mfold+man	snRNA	6694445	6694609	.	+	.	ID=Dpse\GA_MAKA_SPR_26000221;Name=snRNA:U1:3
dpserec_scaffold_2642	blastn+mfold+man	snRNA	6696132	6696296	.	+	.	ID=Dpse\GA_MAKA_SPR_26000222;Name=snRNA:U1:4
dpserec_scaffold_2642	blastn+mfold+man	snRNA	6713845	6714009	.	-	.	ID=Dpse\GA_MAKA_SPR_26000223;Name=snRNA:U1:5
dpserec_scaffold_2642	blastn+mfold+man	snRNA	6715769	6715933	.	-	.	ID=Dpse\GA_MAKA_SPR_26000224;Name=snRNA:U1:6
dpserec_scaffold_2642	blastn+mfold+man	snRNA	6717863	6718027	.	-	.	ID=Dpse\GA_MAKA_SPR_26000225;Name=snRNA:U1:7
dpserec_scaffold_2629	blastn+mfold+man	snRNA	466922	467166	.	+	.	ID=Dpse\GA_MAKA_SPR_26000226;Name=snRNA:U11:1
dpserec_scaffold_2598	blastn+mfold+man	snRNA	701648	701904	.	-	.	ID=Dpse\GA_MAKA_SPR_26000227;Name=snRNA:U12:1
dpserec_scaffold_1779	blastn+mfold+man	snRNA	3625	3816	.	-	.	ID=Dpse\GA_MAKA_SPR_26000228;Name=snRNA:U2:1
dpserec_scaffold_2591	blastn+mfold+man	snRNA	683095	683286	.	+	.	ID=Dpse\GA_MAKA_SPR_26000229;Name=snRNA:U2:2
dpserec_scaffold_2591	blastn+mfold+man	snRNA	699550	699741	.	+	.	ID=Dpse\GA_MAKA_SPR_26000230;Name=snRNA:U2:3
dpserec_scaffold_2612	blastn+mfold+man	snRNA	4076864	4077056	.	-	.	ID=Dpse\GA_MAKA_SPR_26000231;Name=snRNA:U2:4
dpserec_scaffold_2612	blastn+mfold+man	snRNA	4167412	4167603	.	+	.	ID=Dpse\GA_MAKA_SPR_26000232;Name=snRNA:U2:5
dpserec_scaffold_2612	blastn+mfold+man	snRNA	4169573	4169764	.	+	.	ID=Dpse\GA_MAKA_SPR_26000233;Name=snRNA:U2:6
dpserec_scaffold_2612	blastn+mfold+man	snRNA	4199690	4199881	.	+	.	ID=Dpse\GA_MAKA_SPR_26000234;Name=snRNA:U2:7
dpserec_scaffold_2612	blastn+mfold+man	snRNA	4202675	4202866	.	-	.	ID=Dpse\GA_MAKA_SPR_26000235;Name=snRNA:U2:8
dpserec_scaffold_2612	blastn+mfold+man	snRNA	3289672	3289824	.	-	.	ID=Dpse\GA_MAKA_SPR_26000236;Name=snRNA:U4:1
dpserec_scaffold_2612	blastn+mfold+man	snRNA	3310389	3310531	.	-	.	ID=Dpse\GA_MAKA_SPR_26000237;Name=snRNA:U4:2
dpserec_scaffold_2612	blastn+mfold+man	snRNA	4080423	4080564	.	-	.	ID=Dpse\GA_MAKA_SPR_26000238;Name=snRNA:U4:3
dpserec_scaffold_2628	blastn+mfold+man	snRNA	2724692	2724856	.	+	.	ID=Dpse\GA_MAKA_SPR_26000239;Name=snRNA:U4atac:1
dpserec_scaffold_2499	blastn+mfold+man	snRNA	4116236	4116363	.	-	.	ID=Dpse\GA_MAKA_SPR_26000240;Name=snRNA:U5:1
dpserec_scaffold_2513	blastn+mfold+man	snRNA	868677	868800	.	-	.	ID=Dpse\GA_MAKA_SPR_26000241;Name=snRNA:U5:2
dpserec_scaffold_2612	blastn+mfold+man	snRNA	4077797	4077925	.	+	.	ID=Dpse\GA_MAKA_SPR_26000242;Name=snRNA:U5:3
dpserec_scaffold_2612	blastn+mfold+man	snRNA	4082917	4083048	.	-	.	ID=Dpse\GA_MAKA_SPR_26000243;Name=snRNA:U5:4
dpserec_scaffold_2612	blastn+mfold+man	snRNA	4166857	4166984	.	-	.	ID=Dpse\GA_MAKA_SPR_26000244;Name=snRNA:U5:5
dpserec_scaffold_2612	blastn+mfold+man	snRNA	4198981	4199108	.	-	.	ID=Dpse\GA_MAKA_SPR_26000245;Name=snRNA:U5:6
dpserec_scaffold_2612	blastn+mfold+man	snRNA	4203924	4204051	.	+	.	ID=Dpse\GA_MAKA_SPR_26000246;Name=snRNA:U5:7
dpserec_scaffold_2528	blastn+mfold+man	snRNA	46903	47009	.	+	.	ID=Dpse\GA_MAKA_SPR_26000247;Name=snRNA:U6:1
dpserec_scaffold_2528	blastn+mfold+man	snRNA	47698	47804	.	+	.	ID=Dpse\GA_MAKA_SPR_26000248;Name=snRNA:U6:2
dpserec_scaffold_2528	blastn+mfold+man	snRNA	48414	48520	.	+	.	ID=Dpse\GA_MAKA_SPR_26000249;Name=snRNA:U6:3
dpserec_scaffold_2042	blastn+mfold+man	snRNA	1091268	1091364	.	+	.	ID=Dpse\GA_MAKA_SPR_26000250;Name=snRNA:U6atac:1