| |
|
AtCHX21 / At2g31910 ›› ARAMEMNON · TAIR · PLANTS T · MIPS · TIGR
|
| |
|
Exon/Intron Map (revised by K. Bock):
|
| |
|
Sequences ›› cDNA [ None Available ] · BAC F20M17 [ ATG-STOP: 15394 - 12419 ]
|
| |
|
Genomic DNA (3976 bp):
Revised predicted coding sequence in blue.
Start: 500 bp before ATG; End: 500 bp after STOP
1 tccaagaaca tcatgattac atgtgcaacc ctgtgtttta gcctttttcc ttaaatgaaa
61 taaaaatata tcattgtatc actaagggag atattaactc atctatccaa aaaacactga
121 tatcatgtag tactattatt tgataacaag gaaaacagca tgtaattgga ttttataatc
181 cctttataac agactaaaca agaaaaccaa ccaaaattga ctaatttcat ttgcaaaaga
241 gaatacaaag acagctaaat tactagtact tttctatttg acatcaaaca taaaaaaaaa
301 ctataattag caatgacaaa gaagaagatt agagaaaaaa aaaaaaaagg aaaaacagat
361 tgtgtagctc tcacctatta atgcaataaa acaaaacaga tgatgaaaca caaagatttt
421 gtgaaaggga aaaggccaaa accttgggtt ttttttgaga gaatcccgtt taaatctatt
481 aaggaaaatc cccccaataa ATGGCCGATC CCGCAGCTGA ATCTATTGAT GCAAGTTCGT
541 CGCGGTTTGG GAGAGTCGTA TGTTATAACC AAACGGCAAT GCATGGAAGC AACACCATTT
601 CAGCCGCAGC TCCTTTCTTT ATGACGCAAC TGTCTGTCGC TAATCTTACC TACCGCATAC
661 TCTACTATTT TCTTAAGCCT CTATGTCTTC CTCCTTTCGT CGCTCAAATA CTTgtgagta
721 gtcaatcttg aaaacatatt taactaacca ttatcaatct ttaaactgtt ttttttcatt
781 acttattacc cacaactatt gcaaacctat gtttcctttt ttttctttgt tagctatgtc
841 ctaaagagtc ttcatcttca aattcttgat taaatttttg ctaacaatta acttcattgt
901 tctaacgaaa gttcagcttt ttgcttcttt tttttttcga aaacggtgat tttaagataa
961 aaccaaaatg ataaaaaatt taagatttgt ccacttgcaa catacgattt atattattgg
1021 atctttttca aattaatctc gtacataatt tataatatga tcctataata attgtaatga
1081 ttattttgtt tacagTGCGG ATTACTGTTC AGCCCGACTG TGCTCGGCAA TAACGAAGTG
1141 GTCCTTAAAC TTATATTCCC TTATAAATAT ACAATGCTTC TTGAGACATT CGCAAACTTA
1201 GCTCTCGTTT ACAACGTTTT CCTCCTCGGT CTCGGCTTGG ACTTGAGGAT GATAAAGATC
1261 AAAGACATCA AACCAGTGAT CATAGCCATT GTTGGCCTCC TTGCGGCTTT ACTTGCCGGT
1321 GCTGGCTTAT ACTACCTTCC CAGTAACGGA GAGGCCGACA AAATCCTAGC AGGTTGTATG
1381 TACTGGTCGA TCGCATTTGG CTGTACAAAT TTCCCTGATC TTGCTAGGAT TCTTGCGGAT
1441 CTCAAGCTCT TGCGTACGGA TATGGGACAT ACTGCAATGT GTGCAGCCGT TGTTACTGAT
1501 TTGTGCACTT GGATTCTCTT CATTTTTGGA ATGGCGATTT TTTCCAAATC TGgtaactaa
1561 atatggttgt tcccttgtgt tatttttcct cacacacgca tagttactga attatagtac
1621 taacgaaaac catatttaat ttgttagGTG TACGCAACGA AATGTTGCCA TACTCATTAG
1681 CATCAACCAT AGCTTTTGTC CTTCTCTGCT ACTTTGTGAT CCAACCTGGA GTGGCTTGGA
1741 TCTTCAACAA CACCGTCGAA GGAGGTCAAG TGGGAGACAC TCACGTATGG TACACTCTCG
1801 CTGGAGTCAT TATTTGCAGC TTAATCACCG AAGTATGTGG GGTTCACTCA ATTACCGGAG
1861 CATTCTTGTT CGGTCTATCG ATCCCTCATG ACCACATCAT TCGAAAAATG ATCGAAGAGA
1921 AGCTCCACGA TTTCCTCTCG GGAATGCTAA TGCCTCTTTT CTACATCATC TGCGGTTTAA
1981 GAGCTGATAT TGGTTACATG AACAGGACCG TGAGCGTTGG AATGATGGCG GTTGTGACTT
2041 CTGCGTCGGT TATGGTGAAG ATTTTGTCAA CGATGTTTTG CTCCATTTTC TTGCGTATAC
2101 CTTTGCGTGA TGGTTTAGCC ATTGGTGCAC TTATGAATAC CAAGGGAACA ATGGCACTAG
2161 TCATTCTCAA TGCTGGACGA GACACCAAGG CATTGGACGT TATTATGTAC ACTCATCTGA
2221 CGTTGGCGTT TCTAGTGATG TCAATGGTGG TGCAGCCACT ATTAGCCATT GCTTACAAAC
2281 CAAAGAAGAA GTTGATTTTC TATAAAAACC GAACCATTCA AAAACACAAA GGAGAGTCAG
2341 AGCTTTGTGT ATTGACATGC GTCCATGTCC TCCCTAACGT CTCTGGCATA ACCAATCTAT
2401 TACAACTCTC TAACCCGACC AAGAAATCTC CTCTTAACGT TTTTGCTATC CACCTAGTCG
2461 AGCTAACGGG TCGCACCACG GCTTCGTTGC TCATTATGAA CGATGAGGCC AAACCGAAAG
2521 CTAACTTTGC TGACCGAGTT AGAGCGGAAT CTGACCAGAT CGCTGAGATG TTCACAGCTC
2581 TCGAAGTGAA CAACGACGGG GTAATGGTTC AGACCATTAC CGCGGTTTCA CCTTACGCAA
2641 CGATGGACGA AGATATTTGT TTGTTGGCCG AGGATAAACA AGCCTGCTTC ATTTTATTGC
2701 CTTACCACAA GAATATGACG TCAGACGGTC GGTTAAATGA AGGTAACGCA GTGCACGCTG
2761 AAATCAACCA AAACGTTATG AGCCACGCGC CTTGTTCGGT TGGGATTTTG GTTGACCGTG
2821 GCATGACGAC TGTCCGGTTT GAATCTTTTA TGTTCCAAGG CGAAACCACA AAGAAAGAAA
2881 TCGCCATGCT ATTCCTAGGA GGTCGAGACG ACAGAGAGGC TTTGGCTTAC GCTTGGAGGA
2941 TGGTGGGACA AGAAATGGTT CAACTCACGG TCGTTAGATT CGTCCCAAGC CAGGAAGCTT
3001 TAGTCTCAGC CGGGGAAGCC GCGGACGAGT ACGAGAAGGA TAAACATGTC GATGAAGAGT
3061 CCATCTACGA GTTTAACTTC AAGACTATGA ATGATCCATC AGTGACTTAT GTAGAGAAAG
3121 TGGTTAAGAA TGGCCAAGAA ACGATCACAG CGATTTTAGA ACTGGAAGAT AACAATTCTT
3181 ACGATCTTTA CATTGTGGGA AGAGGATATC AAGTAGAAAC ACCTGTGACC TCAGGGTTGA
3241 CAGATTGGAA TAGTACTCCG GATTTAGGGA TTATAGGCGA TACATTAATT TCATCAAACT
3301 TCACAATGCA AGCTTCGGTT CTTGTGGTCC AACAATACTC TTCTGCTAAC AGACAAACCG
3361 CAGAAAACAA CAATCAAGAA CCTGTCCAAG GTAAAGCCAA GACCGATCAT GAGGCTACGC
3421 CTTTTATGGA AGACGAGGAT GATGAAGTAG AACATCAGTA CAGTATGCGC AGATGAttgt
3481 tttttcttaa cccatattgt atacattctt tagatggaat ttataatctt tcttttcata
3541 ttgtaagtat ccccaatgac agattcaata tgctcaagta gaaaccgttg cagcttcttt
3601 cttaaatctt cgactttctc gttcgtttct gttctgttta agttcagatc atcgagccaa
3661 tggtttaaag ctttaaggtg gacgagaaga gactcttttc catttgtttc ttccgtcttc
3721 accaagaaag accctttgtt caatgaattc tccaaatatt tcaagaacca ttggctggaa
3781 acttggacta gctcatccgc tagactcgtt gaatccttca gactgctttt accttctaag
3841 ctacttcggt ctgaaacaga acaatgtttc gttgcaggcg gtttcgcgcc tttgtaggat
3901 ggggttcttg aacttgttgt ctccttgggg ttcagtttct cggatgagtt ctgcataaca
3961 atgtagtgat gatcag
|
| |
|
Revised Predicted Coding Sequence (2499 bp):
1 ATGGCCGATC CCGCAGCTGA ATCTATTGAT GCAAGTTCGT CGCGGTTTGG GAGAGTCGTA
61 TGTTATAACC AAACGGCAAT GCATGGAAGC AACACCATTT CAGCCGCAGC TCCTTTCTTT
121 ATGACGCAAC TGTCTGTCGC TAATCTTACC TACCGCATAC TCTACTATTT TCTTAAGCCT
181 CTATGTCTTC CTCCTTTCGT CGCTCAAATA CTTTGCGGAT TACTGTTCAG CCCGACTGTG
241 CTCGGCAATA ACGAAGTGGT CCTTAAACTT ATATTCCCTT ATAAATATAC AATGCTTCTT
301 GAGACATTCG CAAACTTAGC TCTCGTTTAC AACGTTTTCC TCCTCGGTCT CGGCTTGGAC
361 TTGAGGATGA TAAAGATCAA AGACATCAAA CCAGTGATCA TAGCCATTGT TGGCCTCCTT
421 GCGGCTTTAC TTGCCGGTGC TGGCTTATAC TACCTTCCCA GTAACGGAGA GGCCGACAAA
481 ATCCTAGCAG GTTGTATGTA CTGGTCGATC GCATTTGGCT GTACAAATTT CCCTGATCTT
541 GCTAGGATTC TTGCGGATCT CAAGCTCTTG CGTACGGATA TGGGACATAC TGCAATGTGT
601 GCAGCCGTTG TTACTGATTT GTGCACTTGG ATTCTCTTCA TTTTTGGAAT GGCGATTTTT
661 TCCAAATCTG GTGTACGCAA CGAAATGTTG CCATACTCAT TAGCATCAAC CATAGCTTTT
721 GTCCTTCTCT GCTACTTTGT GATCCAACCT GGAGTGGCTT GGATCTTCAA CAACACCGTC
781 GAAGGAGGTC AAGTGGGAGA CACTCACGTA TGGTACACTC TCGCTGGAGT CATTATTTGC
841 AGCTTAATCA CCGAAGTATG TGGGGTTCAC TCAATTACCG GAGCATTCTT GTTCGGTCTA
901 TCGATCCCTC ATGACCACAT CATTCGAAAA ATGATCGAAG AGAAGCTCCA CGATTTCCTC
961 TCGGGAATGC TAATGCCTCT TTTCTACATC ATCTGCGGTT TAAGAGCTGA TATTGGTTAC
1021 ATGAACAGGA CCGTGAGCGT TGGAATGATG GCGGTTGTGA CTTCTGCGTC GGTTATGGTG
1081 AAGATTTTGT CAACGATGTT TTGCTCCATT TTCTTGCGTA TACCTTTGCG TGATGGTTTA
1141 GCCATTGGTG CACTTATGAA TACCAAGGGA ACAATGGCAC TAGTCATTCT CAATGCTGGA
1201 CGAGACACCA AGGCATTGGA CGTTATTATG TACACTCATC TGACGTTGGC GTTTCTAGTG
1261 ATGTCAATGG TGGTGCAGCC ACTATTAGCC ATTGCTTACA AACCAAAGAA GAAGTTGATT
1321 TTCTATAAAA ACCGAACCAT TCAAAAACAC AAAGGAGAGT CAGAGCTTTG TGTATTGACA
1381 TGCGTCCATG TCCTCCCTAA CGTCTCTGGC ATAACCAATC TATTACAACT CTCTAACCCG
1441 ACCAAGAAAT CTCCTCTTAA CGTTTTTGCT ATCCACCTAG TCGAGCTAAC GGGTCGCACC
1501 ACGGCTTCGT TGCTCATTAT GAACGATGAG GCCAAACCGA AAGCTAACTT TGCTGACCGA
1561 GTTAGAGCGG AATCTGACCA GATCGCTGAG ATGTTCACAG CTCTCGAAGT GAACAACGAC
1621 GGGGTAATGG TTCAGACCAT TACCGCGGTT TCACCTTACG CAACGATGGA CGAAGATATT
1681 TGTTTGTTGG CCGAGGATAA ACAAGCCTGC TTCATTTTAT TGCCTTACCA CAAGAATATG
1741 ACGTCAGACG GTCGGTTAAA TGAAGGTAAC GCAGTGCACG CTGAAATCAA CCAAAACGTT
1801 ATGAGCCACG CGCCTTGTTC GGTTGGGATT TTGGTTGACC GTGGCATGAC GACTGTCCGG
1861 TTTGAATCTT TTATGTTCCA AGGCGAAACC ACAAAGAAAG AAATCGCCAT GCTATTCCTA
1921 GGAGGTCGAG ACGACAGAGA GGCTTTGGCT TACGCTTGGA GGATGGTGGG ACAAGAAATG
1981 GTTCAACTCA CGGTCGTTAG ATTCGTCCCA AGCCAGGAAG CTTTAGTCTC AGCCGGGGAA
2041 GCCGCGGACG AGTACGAGAA GGATAAACAT GTCGATGAAG AGTCCATCTA CGAGTTTAAC
2101 TTCAAGACTA TGAATGATCC ATCAGTGACT TATGTAGAGA AAGTGGTTAA GAATGGCCAA
2161 GAAACGATCA CAGCGATTTT AGAACTGGAA GATAACAATT CTTACGATCT TTACATTGTG
2221 GGAAGAGGAT ATCAAGTAGA AACACCTGTG ACCTCAGGGT TGACAGATTG GAATAGTACT
2281 CCGGATTTAG GGATTATAGG CGATACATTA ATTTCATCAA ACTTCACAAT GCAAGCTTCG
2341 GTTCTTGTGG TCCAACAATA CTCTTCTGCT AACAGACAAA CCGCAGAAAA CAACAATCAA
2401 GAACCTGTCC AAGGTAAAGC CAAGACCGAT CATGAGGCTA CGCCTTTTAT GGAAGACGAG
2461 GATGATGAAG TAGAACATCA GTACAGTATG CGCAGATGA
|
| |
|
Revised Predicted Protein Sequence (832 aa):
1 MADPAAESID ASSSRFGRVV CYNQTAMHGS NTISAAAPFF MTQLSVANLT YRILYYFLKP
61 LCLPPFVAQI LCGLLFSPTV LGNNEVVLKL IFPYKYTMLL ETFANLALVY NVFLLGLGLD
121 LRMIKIKDIK PVIIAIVGLL AALLAGAGLY YLPSNGEADK ILAGCMYWSI AFGCTNFPDL
181 ARILADLKLL RTDMGHTAMC AAVVTDLCTW ILFIFGMAIF SKSGVRNEML PYSLASTIAF
241 VLLCYFVIQP GVAWIFNNTV EGGQVGDTHV WYTLAGVIIC SLITEVCGVH SITGAFLFGL
301 SIPHDHIIRK MIEEKLHDFL SGMLMPLFYI ICGLRADIGY MNRTVSVGMM AVVTSASVMV
361 KILSTMFCSI FLRIPLRDGL AIGALMNTKG TMALVILNAG RDTKALDVIM YTHLTLAFLV
421 MSMVVQPLLA IAYKPKKKLI FYKNRTIQKH KGESELCVLT CVHVLPNVSG ITNLLQLSNP
481 TKKSPLNVFA IHLVELTGRT TASLLIMNDE AKPKANFADR VRAESDQIAE MFTALEVNND
541 GVMVQTITAV SPYATMDEDI CLLAEDKQAC FILLPYHKNM TSDGRLNEGN AVHAEINQNV
601 MSHAPCSVGI LVDRGMTTVR FESFMFQGET TKKEIAMLFL GGRDDREALA YAWRMVGQEM
661 VQLTVVRFVP SQEALVSAGE AADEYEKDKH VDEESIYEFN FKTMNDPSVT YVEKVVKNGQ
721 ETITAILELE DNNSYDLYIV GRGYQVETPV TSGLTDWNST PDLGIIGDTL ISSNFTMQAS
781 VLVVQQYSSA NRQTAENNNQ EPVQGKAKTD HEATPFMEDE DDEVEHQYSM RR
›› Fasta: All CHX Protein Sequences
|
| |
Back to the Top · Last Revision: October 16, 2006 |
