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AtCHX20 / At3g53720 ›› ARAMEMNON · TAIR · PLANTS T · MIPS · TIGR
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Exon/Intron Map (from TIGR):
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Sequences ›› full cDNA [ Riken ] · partial cDNA [ Sze Lab ] · BAC F5K20 [ ATG-STOP: 12536 - 8335 ]
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Genomic DNA (5202 bp):
Coding sequence -- confirmed by cDNA (full-length Riken and partial Sze Lab) -- in blue.
Start: 500 bp before ATG; End: 500 bp after STOP
1 cttattttag tttgcaattt ccgtctgtga gacgagttgt ttcttttttt cttctcaata
61 ctaaatttat gttattagtt ttgcttgaaa taaaactgat aagaatgagt tatagcaacc
121 acaaattgtt tttgagtaga tttttacttt ctatacttta ttgtaaacat gaacaattca
181 aagacataga tggtttctaa ttatagcacc caaaatctaa tggtttttaa attttctact
241 aaaaaaacaa atatcataag aaaaaaaaaa aaaaccaaat acttccactc aaggtctagt
301 cacacgtgag atgcaccaaa attacaagta acaacataat tacttttttg aatcttcaaa
361 ccaatacatt tataattttt gcctataaat ttcttcacat atcttcttca tacttgaact
421 atatcacatg ttccaaatat agacgagaac aaaacaaaaa aaaaaagtcg tcgataagag
481 agtcctttga aatccccaaa ATGCCCTTCA ACATAACCTC CGTGAAAACC TCATCTAACG
541 GAGTATGGCA AGGCGACAAT CCTTTAAACT TCGCTTTTCC GTTACTCATC GTCCAAACGG
601 CGTTAATCAT CGCCGTCAGT CGCTTCCTCG CCGTCTTATT CAAACCTCTC CGTCAACCCA
661 AAGTCATCGC CGAGATTGTC gtacgttaaa aattacactc taaccccaca cacactaact
721 atttacaatt ttaccataat aatcttctta atttacaatt ctgccatcgt cttcttcttc
781 agGGAGGGAT TTTGTTAGGA CCATCGGCTT TAGGTAGAAA CATGGCGTAC ATGGACCGTA
841 TATTTCCGAA ATGGAGTATG CCGATACTCG AATCCGTCGC GAGCATAGGA CTTCTCTTCT
901 TCCTCTTCCT CGTCGGTCTA GAACTCGATT TATCATCGAT CCGACGAAGC GGCAAACGCG
961 CTTTCGGAAT CGCAGTCGCT GGAATTACAC TACCGTTTAT CGCCGGCGTC GGAGTCGCGT
1021 TTGTGATCCG TAACACTCTC TACACCGCCG CGGATAAACC AGGTTACGCC GAGTTTCTCG
1081 TTTTCATGGG AGTCGCACTC TCGATCACAG CTTTTCCGGT ACTTGCGCGT ATTTTAGCAG
1141 AGCTCAAGCT TTTAACGACT CAGATAGGAG AAACCGCGAT GGCTGCAGCC GCTTTTAACG
1201 ATGTAGCCGC GTGGATTTTA CTCGCTTTAG CGGTTGCGTT AGCGGGTAAT GGCGGTGAGG
1261 GAGGTGGAGA GAAAAAGAGT CCGTTAGTGT CGTTGTGGGT TTTGTTATCG GGCGCTGGGT
1321 TTGTGGTTTT TATGTTGGTT GTGATCCGAC CCGGAATGAA ATGGGTCGCG AAACGTGGAT
1381 CTCCTGAAAA CGACGTCGTA CGCGAGTCTT ACGTGTGTTT GACGTTAGCC GGTGTTATGG
1441 TTTCCGGTTT CGCGACGGAT TTAATTGGGA TTCATTCGAT TTTTGGAGCG TTTGTTTTCG
1501 GTTTGACTAT ACCGAAAGAT GGAGAGTTTG GTCAGCGATT GATTGAACGA ATTGAGGATT
1561 TTGTTTCCGG TTTACTCTTA CCGCTTTATT TCGCTACGAG TGGTTTGAAG ACTGACGTGG
1621 CTAAGATTAG AGGAGCTGAG TCGTGGGGGA TGTTGGGTCT TGTTGTTGTT ACGGCTTGTG
1681 CCGGGAAGAT AGTCGGAACT TTTGTTGTGG CGGTGATGGT TAAAGTTCCG GCGAGAGAGG
1741 CGTTGACACT TGGTTTCTTG ATGAATACTA AAGGTTTAGT GGAGCTCATT GTACTCAACA
1801 TAGGCAAGGA GAAAAAGgtt agttttgtct tccttttttc tgatttttta aggttcttgt
1861 ttacgctttt agttatctga tgaatattat aaatataaaa aacctagtaa cactaaagtt
1921 atttgatcat gtttagtgga taaagcatat aaaacaaaat acgattatta tattgattta
1981 atcgcatcta tacctttatt ttagggtgtt tagatatatt taaaaattta ggttctagtt
2041 ggatccatgt gtatatgcgt ccggtccgct caatattggt aggctggtcg gggatccgga
2101 atagtaaaat tgcttatgtt ttatttgaac attaaccaac cgttgtataa attcaaattg
2161 atagctaggc aggcccggct ctaggggagt gccagaggtg ctagtacaca gggtcctcat
2221 ttttttttct taattttaag tcttctagtt tgcagttttt ttttttttaa ggggaaaact
2281 acaaaaaaaa caaccaccaa aataaaagat aataagttta aaataaaaat acagtaaaca
2341 catgtcacat aaagttattt tgtttagatt taagggctat ttttgtttgt agcacagggc
2401 ccaataaaat attgagccgg gctgctaggt ttactatcac tataatagac acggttgcaa
2461 tttgatagct aggtttgctc tcaaccgttg tatagtaata ttagtcacca taatacaaat
2521 ctgcagttca ttaatcatag actgatggac acggttgcaa tttgatagct aagtttacta
2581 tgtgcatcga agatgatgca gttagcaatg gtagcttcaa aacattagtc cgtgattctt
2641 ttgtcacctc cgaaataaac atttttatct taaatatatg tgcaagatta tactataatg
2701 cttctggaaa tatgtagtat ataaaatttt ttgtttaaac gtgtcttccc aacaaagatt
2761 atagttatat actacacttt tattataaag gcgtttctta ttgttttggg gtaataaaga
2821 aaaactgatc aattaaggac tagtcatata tatgcatgca tgaaaacttt atttttattt
2881 ttttttctgc atgaaaactt tatacgaata taccttttcg aatgggccaa tgtttacgta
2941 atcgtcactt actgatccac ttgcagattt atgatcttct tcataatgca acaataaagt
3001 gaaataatga ttacccatta atgtagtaag tgtggttatt tttaattaaa ctgtttgtac
3061 gcggggttga ctttaaccag GTACTAAACG ACGAGACGTT TGCAATACTA GTGCTAATGG
3121 CACTCTTCAC AACGTTCATA ACGACGCCTA CTGTAATGGC CATTTACAAG CCGGCACGTG
3181 GCACCCACCG CAAACTAAAA GACTTGTCGG CGAGCCAAGA CTCCACCAAG GAAGAGCTTC
3241 GCATCCTAGC CTGCCTCCAC GGCCCAGCCA ATGTCTCCTC CCTCATCTCT CTCGTCGAGT
3301 CCATCCGAAC CACCAAGgta aattaccttt cttttatatt tttacgttac aataatctat
3361 atttaaattt gtaaatctat gataagagtt atatcagaaa attaagatat cattgaaatg
3421 ctcaatgaaa atgtatccta cgtataatta cacacatttt gtatagttaa aattaaaaat
3481 cagctgggta ataatttata atcttggtta ataatttaaa aagtcgtatt tgttttggca
3541 gATACTACGG CTAAAGCTGT TTGTGATGCA TCTGATGGAA CTAACGGAAC GGTCTTCGTC
3601 AATCATAATG GTGCAAAGAG CCCGTAAAAA CGGACTTCCT TTCGTTCACC GTTACCGTCA
3661 TGGTGAGCGT CACAGCAACG TCATAGGAGG CTTCGAAGCC TATCGTCAAC TAGGCCGGGT
3721 CGCAGTCCGG CCCATCACCG CAGTCTCTCC ATTACCCACA ATGCACGAAG ACATTTGCCA
3781 CATGGCAGAT ACCAAGAGGG TCACAATGAT CATTTTACCT TTCCACAAAC GATGGAACGC
3841 TGATCATGGT CATAGCCACC ACCACCAAGA CGGAGGAGGA GATGGAAACG TACCGGAAAA
3901 CGTTGGTCAT GGTTGGCGAT TGGTTAACCA AAGGGTTTTG AAGAATGCGC CGTGTTCGGT
3961 GGCGGTTCTT GTAGACCGTG GACTTGGGTC CATTGAGGCC CAAACTTTGA GCTTAGATGG
4021 GTCGAATGTG GTTGAAAGGG TTTGTGTGAT TTTCTTTGGT GGGCCTGATG ACCGTGAGTC
4081 TATAGAGCTC GGCGGGAGAA TGGCTGAGCA TCCGGCCGTT AAAGTTACCG TTATTAGGTT
4141 TTTGGTAAGA GAAACGTTGA GGAGTACCGC CGTCACTTTA CGACCGGCAC CGTCTAAAGG
4201 CAAGGAGAAG AACTATGCCT TTTTAACAAC CAACGTGGAT CCAGAAAAAG AAAAGgtaaa
4261 tctcttttga tcccctatgt ttatatacca gttatgacaa atataactat agctttcttt
4321 cttggaaaaa taattatagG AATTAGACGA AGGGGCATTG GAAGACTTCA AGAGCAAATG
4381 GAAAGAAATG GTGGAGTACA AAGAAAAGGA ACCAAACAAC ATCATTGAAG AAATACTGTC
4441 AATAGGACAG AGTAAAGACT TTGATCTAAT AGTGGTTGGA AGAGGGAGGA TACCGTCGGC
4501 CGAGGTGGCG GCATTAGCTG AGCGTCAAGC TGAACATCCT GAGTTAGGTC CTATCGGAGA
4561 CGTGCTCGCC TCTTCGATCA ACCACATCAT TCCATCAATC CTTGTGGTTC AACAACACAA
4621 CAAAGCTCAT GTAGAGGATA TTACGGTTTC CAAAATTGTT AGTGAGTCTT CTCTAAGTAT
4681 TAACGGAGAC ACAAATGTAT GAtaacaata aataaattga tctagtactt aaacttcggc
4741 ttaatgcatg gttaaagtgg ttagttgaag atgtagttta tctacaatat atagatagct
4801 cttgagtaag aattgtaaga tcgtctacat ataaataacc atgattgggc atcttgggca
4861 tcgtctacat ataatttcat atttggacta aatagtaaat acaattatca tttgggccat
4921 ttgagaaact accggaaacc tctcacgtgc cagagacacg taccaaaaaa aaccccgaac
4981 atttattagg aagaagagaa aaaacggaaa agaaaaaaaa acgcatcaat ctgagcagca
5041 caagtctgcg agatttggat tagatctgat tcaggttgga ttgatcatcg ttcggagctc
5101 cgggaaacat ggcggcgacg agacaattac gaactctcca atctcagcct gaaaacaagg
5161 tatgtgtcga ttgcgctcag aagaatcctc aatgggcgtc gg
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Coding Sequence (2529 bp):
1 ATGCCCTTCA ACATAACCTC CGTGAAAACC TCATCTAACG GAGTATGGCA AGGCGACAAT
61 CCTTTAAACT TCGCTTTTCC GTTACTCATC GTCCAAACGG CGTTAATCAT CGCCGTCAGT
121 CGCTTCCTCG CCGTCTTATT CAAACCTCTC CGTCAACCCA AAGTCATCGC CGAGATTGTC
181 GGAGGGATTT TGTTAGGACC ATCGGCTTTA GGTAGAAACA TGGCGTACAT GGACCGTATA
241 TTTCCGAAAT GGAGTATGCC GATACTCGAA TCCGTCGCGA GCATAGGACT TCTCTTCTTC
301 CTCTTCCTCG TCGGTCTAGA ACTCGATTTA TCATCGATCC GACGAAGCGG CAAACGCGCT
361 TTCGGAATCG CAGTCGCTGG AATTACACTA CCGTTTATCG CCGGCGTCGG AGTCGCGTTT
421 GTGATCCGTA ACACTCTCTA CACCGCCGCG GATAAACCAG GTTACGCCGA GTTTCTCGTT
481 TTCATGGGAG TCGCACTCTC GATCACAGCT TTTCCGGTAC TTGCGCGTAT TTTAGCAGAG
541 CTCAAGCTTT TAACGACTCA GATAGGAGAA ACCGCGATGG CTGCAGCCGC TTTTAACGAT
601 GTAGCCGCGT GGATTTTACT CGCTTTAGCG GTTGCGTTAG CGGGTAATGG CGGTGAGGGA
661 GGTGGAGAGA AAAAGAGTCC GTTAGTGTCG TTGTGGGTTT TGTTATCGGG CGCTGGGTTT
721 GTGGTTTTTA TGTTGGTTGT GATCCGACCC GGAATGAAAT GGGTCGCGAA ACGTGGATCT
781 CCTGAAAACG ACGTCGTACG CGAGTCTTAC GTGTGTTTGA CGTTAGCCGG TGTTATGGTT
841 TCCGGTTTCG CGACGGATTT AATTGGGATT CATTCGATTT TTGGAGCGTT TGTTTTCGGT
901 TTGACTATAC CGAAAGATGG AGAGTTTGGT CAGCGATTGA TTGAACGAAT TGAGGATTTT
961 GTTTCCGGTT TACTCTTACC GCTTTATTTC GCTACGAGTG GTTTGAAGAC TGACGTGGCT
1021 AAGATTAGAG GAGCTGAGTC GTGGGGGATG TTGGGTCTTG TTGTTGTTAC GGCTTGTGCC
1081 GGGAAGATAG TCGGAACTTT TGTTGTGGCG GTGATGGTTA AAGTTCCGGC GAGAGAGGCG
1141 TTGACACTTG GTTTCTTGAT GAATACTAAA GGTTTAGTGG AGCTCATTGT ACTCAACATA
1201 GGCAAGGAGA AAAAGGTACT AAACGACGAG ACGTTTGCAA TACTAGTGCT AATGGCACTC
1261 TTCACAACGT TCATAACGAC GCCTACTGTA ATGGCCATTT ACAAGCCGGC ACGTGGCACC
1321 CACCGCAAAC TAAAAGACTT GTCGGCGAGC CAAGACTCCA CCAAGGAAGA GCTTCGCATC
1381 CTAGCCTGCC TCCACGGCCC AGCCAATGTC TCCTCCCTCA TCTCTCTCGT CGAGTCCATC
1441 CGAACCACCA AGATACTACG GCTAAAGCTG TTTGTGATGC ATCTGATGGA ACTAACGGAA
1501 CGGTCTTCGT CAATCATAAT GGTGCAAAGA GCCCGTAAAA ACGGACTTCC TTTCGTTCAC
1561 CGTTACCGTC ATGGTGAGCG TCACAGCAAC GTCATAGGAG GCTTCGAAGC CTATCGTCAA
1621 CTAGGCCGGG TCGCAGTCCG GCCCATCACC GCAGTCTCTC CATTACCCAC AATGCACGAA
1681 GACATTTGCC ACATGGCAGA TACCAAGAGG GTCACAATGA TCATTTTACC TTTCCACAAA
1741 CGATGGAACG CTGATCATGG TCATAGCCAC CACCACCAAG ACGGAGGAGG AGATGGAAAC
1801 GTACCGGAAA ACGTTGGTCA TGGTTGGCGA TTGGTTAACC AAAGGGTTTT GAAGAATGCG
1861 CCGTGTTCGG TGGCGGTTCT TGTAGACCGT GGACTTGGGT CCATTGAGGC CCAAACTTTG
1921 AGCTTAGATG GGTCGAATGT GGTTGAAAGG GTTTGTGTGA TTTTCTTTGG TGGGCCTGAT
1981 GACCGTGAGT CTATAGAGCT CGGCGGGAGA ATGGCTGAGC ATCCGGCCGT TAAAGTTACC
2041 GTTATTAGGT TTTTGGTAAG AGAAACGTTG AGGAGTACCG CCGTCACTTT ACGACCGGCA
2101 CCGTCTAAAG GCAAGGAGAA GAACTATGCC TTTTTAACAA CCAACGTGGA TCCAGAAAAA
2161 GAAAAGGAAT TAGACGAAGG GGCATTGGAA GACTTCAAGA GCAAATGGAA AGAAATGGTG
2221 GAGTACAAAG AAAAGGAACC AAACAACATC ATTGAAGAAA TACTGTCAAT AGGACAGAGT
2281 AAAGACTTTG ATCTAATAGT GGTTGGAAGA GGGAGGATAC CGTCGGCCGA GGTGGCGGCA
2341 TTAGCTGAGC GTCAAGCTGA ACATCCTGAG TTAGGTCCTA TCGGAGACGT GCTCGCCTCT
2401 TCGATCAACC ACATCATTCC ATCAATCCTT GTGGTTCAAC AACACAACAA AGCTCATGTA
2461 GAGGATATTA CGGTTTCCAA AATTGTTAGT GAGTCTTCTC TAAGTATTAA CGGAGACACA
2521 AATGTATGA
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Protein Sequence (842 aa):
1 MPFNITSVKT SSNGVWQGDN PLNFAFPLLI VQTALIIAVS RFLAVLFKPL RQPKVIAEIV
61 GGILLGPSAL GRNMAYMDRI FPKWSMPILE SVASIGLLFF LFLVGLELDL SSIRRSGKRA
121 FGIAVAGITL PFIAGVGVAF VIRNTLYTAA DKPGYAEFLV FMGVALSITA FPVLARILAE
181 LKLLTTQIGE TAMAAAAFND VAAWILLALA VALAGNGGEG GGEKKSPLVS LWVLLSGAGF
241 VVFMLVVIRP GMKWVAKRGS PENDVVRESY VCLTLAGVMV SGFATDLIGI HSIFGAFVFG
301 LTIPKDGEFG QRLIERIEDF VSGLLLPLYF ATSGLKTDVA KIRGAESWGM LGLVVVTACA
361 GKIVGTFVVA VMVKVPAREA LTLGFLMNTK GLVELIVLNI GKEKKVLNDE TFAILVLMAL
421 FTTFITTPTV MAIYKPARGT HRKLKDLSAS QDSTKEELRI LACLHGPANV SSLISLVESI
481 RTTKILRLKL FVMHLMELTE RSSSIIMVQR ARKNGLPFVH RYRHGERHSN VIGGFEAYRQ
541 LGRVAVRPIT AVSPLPTMHE DICHMADTKR VTMIILPFHK RWNADHGHSH HHQDGGGDGN
601 VPENVGHGWR LVNQRVLKNA PCSVAVLVDR GLGSIEAQTL SLDGSNVVER VCVIFFGGPD
661 DRESIELGGR MAEHPAVKVT VIRFLVRETL RSTAVTLRPA PSKGKEKNYA FLTTNVDPEK
721 EKELDEGALE DFKSKWKEMV EYKEKEPNNI IEEILSIGQS KDFDLIVVGR GRIPSAEVAA
781 LAERQAEHPE LGPIGDVLAS SINHIIPSIL VVQQHNKAHV EDITVSKIVS ESSLSINGDT
841 NV
›› Fasta: All CHX Protein Sequences
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