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AtCHX01 / At1g16380 ›› ARAMEMNON · TAIR · PLANTS T · MIPS · TIGR
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Exon/Intron Map (from TIGR):
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Sequences ›› partial cDNA [ Sze Lab ] · BAC F3O9 [ ATG-STOP: 56376 - 53462 ]
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Genomic DNA (3915 bp):
Coding sequence -- confirmed by cDNA from Sze Lab -- in blue.
Start: 500 bp before ATG; End: 500 bp after STOP
1 tatacctgtt aatttaattc atacatttag tacaatacaa ttttacatac ataaaagcta
61 tactttttcc ttgacaaaaa attattgctt tttttttttt ttccgttgga tgcaatgtta
121 attaatactt ttgaaaatat taagtctaca tagttttctt gctgaaatcg acacttttct
181 attatcttac aaaaacaaaa acttactcct ttaaacctac tccaataatt catgcatttt
241 ccgattatag taagtatatc cgcttttaat ggggaaaatt aaatgtgtcg acaagaaaaa
301 taaatggcgt aaaacagagg catggagtaa tcgaaggata atcaggtaaa tgtaaacccc
361 ttaaactcca accaagataa attaatactt aaaaaacctg aaaaatatat attcttcttt
421 ttaggagaaa ttgaagtttc tttcacattt tatttttccc gcattgaact ttgaagaatg
481 ctcaaaatcg aatcaagaaa ATGGATCCAA AGATGTTGTT TTGTTTGCCA GAAGGAGATG
541 CATTGTTTAA TCCACTCAAT ACAATGTTTA TTCAAATGGC TTGCATTCTC GTCTTCTCTC
601 AATTCTTCTA CCTATTCCTA AAACCCTGTG GCCAAGCCGG TCCCGTTGCC CAGATTCTCg
661 taagttttgt taaaaaatac tttctaaaca cttttttttt tgttttaaag ttttcgcaat
721 ttgactccta aactctatga tagtgaaacc caaacccaag taaaattcat gcacaaaatc
781 gttattatag tactcataaa ttgacgtttt attatagtat ccatgatttc tatttttttt
841 acaaaattta ctccctgaac tttacgagtg tgcacttaaa ccctaagagt agcctgttgt
901 gcaagaatgt taataaggtt tcgtttcagg aaaattgaca tattataaca ttcagaaaaa
961 actgacgttt taatcatttt tgctcagGCT GGGATTGTGT TGAGTTTGCT CACAATAATC
1021 CGCAAAGTCC ACGAATTTTT CCTCCAGAAA GATTCAGCAA GCTATTACAT CTTTTTCTCA
1081 TTCCTTTTAC GAACAGCCTT TGTGTTCTTG ATCGGTCTCG AGATCGATCT TGACTTCATG
1141 AAACGAAACT TGAAGAACTC CATTGTCATA ACTTTGGGCT CCTTAGTCAT TTCTGGCATC
1201 ATCTGGCTCC CTTTCCTCTG GTTTCTCATC CGTTTCATGC AGATCAAAGG CGATTTCTTA
1261 ACATTTTACT TAGCCTTCCT CATTACCTTG TCCAACACGG CAGCTCCTGT CGTCATCCGT
1321 TCGATCATCG ATTGGAAACT GCACACATCT GAGATCGGAC GGCTAGCAAT CTCATGCGGA
1381 TTGTTCATAG AGATAACCAA CATATTTATC TACACTATCG TCCTTTCTTT CATCTCCGGG
1441 ACTATGACTG CTGATATTTT TATCTACTCA TTTGCCACAG GAGTTATAAT CTTGACTAAT
1501 AGATTCTTAG CTTCATGGCT CCCAAAAAGA AACCCTAAAG AGAAATATCT CTCCAAAGCT
1561 GAAACGCTTG CTTTCATCAT CCTTATTCTA ATCATCGCGT TAACCATCGA ATCCAGCAAC
1621 TTAAACTCAA CGCTTTTTGT GTTTATCATC GGATTAATGT TTCCAAGAGA AGGAAAAACT
1681 TACAGAACGT TGATCCAACG GTTGAGTTAC CCGATTCACG AGTTTGTCCT TCCGGTTTAC
1741 TTTGGTTACA TCGGATTTAG ATTCAGCGTC AATTCGTTAA CCAAACGCCA CTACCTCGTC
1801 CTTGGTATGA CTGTGGCTTT AAGCCTACTG GGGAAGCTTC TAGGAGTTTT ATTCGCTTGT
1861 TCATTCTTGA AGATCCCAAA GCAGTATTGG CTTTTCTTGT CAACCATGCT TTCCGTCAAA
1921 GGTCATATAG GTCTTGTTCT TCTCGACTCT AACTTGATGT ACAAGgtatt acaacaaatt
1981 acgacttctc gttaatttag gtttcaagtc ggttgataat cttcatctcc gtgttattga
2041 ttttctcttt gtagAAATGG TTTACTCCGG TAGTTCATGA TATGTTCGTT GCGGCTCTAG
2101 TGATCATGAC TTTGTTAAGC GGAGTTATAA CATCTTTGTT GCTTAGAAGT CAAGAAAAGA
2161 GTTTCGCACA TATAAAAACA TCACTTGAGT TATTTGACAC TACCGAGGAG CTACGAGTGT
2221 TGACGTGCGT CTATGGCGTT CGTCATGCTC GTGGATCGAT CTCTTTAGTC TCTGCTCTAA
2281 GTGGCTTTTC TCCTGGAACT TCTTCTTCGC CGTTCACGCC TTACCTTATG CACCTCATAC
2341 CGCTCCCGAA GAAGCGGAAA ACTGAATTGT TGTACCACGA ATTAGACGAA GATGCAGGAA
2401 ATTCCAACGG CGGAGACGAT GAGTTCGGGA CTAATGAAGG ACTAGAGATC AATGACTCGA
2461 TCGATTCGTT TACTAGAGAC AGAAAAATAA TGGTCCGGCA GGTGAAACTT GTGGCGCCGA
2521 TGGAGAATAT GCACGAAGAG ATCTGTAACG CCACTGAAGA TCTTCGTGTA TCGATCGTGT
2581 TTCTACCTTT CCATAAACAC CAGAGGATCG ACGGGAAAAC CACGAATGAC GGGGAAGTTT
2641 TTCGACATAT GAACCGGAAG GTTCTAAAGC AAGCTCAATG TTCGATTGGT ATCTTTGTGG
2701 ATAGAAACAT AACAGGGTTT CACCAGCTTC ACGGGTCTGA TTCGGTACAA CACGTTGCTG
2761 CATTGTTCTT CGGTGGTCCT GATGATCGTG AGGCTCTGTC CTTGTGCAAG TGGCTTACCA
2821 ATAACTCTCA GATTCACCTC ACTGTCATAC AGTTTGTGGC GGATGACTCA AAGACAGAGA
2881 AAATTGTCGG AGACGCGGTG ACCAAGGAAA ACAACGAAGT ATTCTTGGAG ATTGTTAGTG
2941 AAGATCAAAC CGAAAACGAA ACAGATCGAA TCTTCTTAGA AGAATTCTAT CACAGgtacc
3001 ttacaaatac tctgctcctg caaatactct gtttttggca tgactagtac tctgtttcta
3061 tgttcctaca cacatactct gtttccgtta ctctgttttt tcatttatag agatggtttt
3121 tatttgtctt gacagATTTG TGACGACGGG GCAAGTTGGA TTCATAGAGA AGCGAGTGAG
3181 CAACGGAATG CAGACGCTGA CAATTCTAAG AGAGATCGGG GAGATGTATT CACTGTTTGT
3241 GGTAGGAAAA AACAGAGGAG ATTGTCCAAT GACTTCAGGA ATGAATGATT GGGAAGAGTG
3301 TCCGGAATTA GGAACGGTCG GAGATTTCTT GGCTTCATCA AATATGGATG TAAATGCTTC
3361 TGTATTAGTA GTTCAAAGAC ATAGAAACTC ATTTGATAGC TTTGTAGATG AATAGcaaat
3421 actctttagt ttttacttga cacaacttaa aatagtttac tcttaaaatc aagacaaaca
3481 tcacataata gaaaacatat gaaaatggag aatgtttgag ctaaacaaac tcttaaactc
3541 tcagcaaaca tggctggtat ttacggcttg atctctcttt tcttgttctt ccatcgaatc
3601 gcagagactc aaaccttttg tctcaggcag aatcaaaacg aacattccta aaccagacat
3661 tgcaattcca aaaatcgcaa acgatactga gggtatgtat cttccaatcg aagcaattag
3721 cggacaacaa gctcctccaa cgacaagagc ctgtctaaac atcattgttg ccgagcttct
3781 cacacaagtt ggaaacattt caaccataaa aactgccata aggttaaatc cgattctagc
3841 gcagaagaat gttccgagtt cgaaggcaaa cgcgatctct gttttgccga gaatgctgag
3901 aacgaaacag agcac
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Coding Sequence (2358 bp):
1 ATGGATCCAA AGATGTTGTT TTGTTTGCCA GAAGGAGATG CATTGTTTAA TCCACTCAAT
61 ACAATGTTTA TTCAAATGGC TTGCATTCTC GTCTTCTCTC AATTCTTCTA CCTATTCCTA
121 AAACCCTGTG GCCAAGCCGG TCCCGTTGCC CAGATTCTCG CTGGGATTGT GTTGAGTTTG
181 CTCACAATAA TCCGCAAAGT CCACGAATTT TTCCTCCAGA AAGATTCAGC AAGCTATTAC
241 ATCTTTTTCT CATTCCTTTT ACGAACAGCC TTTGTGTTCT TGATCGGTCT CGAGATCGAT
301 CTTGACTTCA TGAAACGAAA CTTGAAGAAC TCCATTGTCA TAACTTTGGG CTCCTTAGTC
361 ATTTCTGGCA TCATCTGGCT CCCTTTCCTC TGGTTTCTCA TCCGTTTCAT GCAGATCAAA
421 GGCGATTTCT TAACATTTTA CTTAGCCTTC CTCATTACCT TGTCCAACAC GGCAGCTCCT
481 GTCGTCATCC GTTCGATCAT CGATTGGAAA CTGCACACAT CTGAGATCGG ACGGCTAGCA
541 ATCTCATGCG GATTGTTCAT AGAGATAACC AACATATTTA TCTACACTAT CGTCCTTTCT
601 TTCATCTCCG GGACTATGAC TGCTGATATT TTTATCTACT CATTTGCCAC AGGAGTTATA
661 ATCTTGACTA ATAGATTCTT AGCTTCATGG CTCCCAAAAA GAAACCCTAA AGAGAAATAT
721 CTCTCCAAAG CTGAAACGCT TGCTTTCATC ATCCTTATTC TAATCATCGC GTTAACCATC
781 GAATCCAGCA ACTTAAACTC AACGCTTTTT GTGTTTATCA TCGGATTAAT GTTTCCAAGA
841 GAAGGAAAAA CTTACAGAAC GTTGATCCAA CGGTTGAGTT ACCCGATTCA CGAGTTTGTC
901 CTTCCGGTTT ACTTTGGTTA CATCGGATTT AGATTCAGCG TCAATTCGTT AACCAAACGC
961 CACTACCTCG TCCTTGGTAT GACTGTGGCT TTAAGCCTAC TGGGGAAGCT TCTAGGAGTT
1021 TTATTCGCTT GTTCATTCTT GAAGATCCCA AAGCAGTATT GGCTTTTCTT GTCAACCATG
1081 CTTTCCGTCA AAGGTCATAT AGGTCTTGTT CTTCTCGACT CTAACTTGAT GTACAAGAAA
1141 TGGTTTACTC CGGTAGTTCA TGATATGTTC GTTGCGGCTC TAGTGATCAT GACTTTGTTA
1201 AGCGGAGTTA TAACATCTTT GTTGCTTAGA AGTCAAGAAA AGAGTTTCGC ACATATAAAA
1261 ACATCACTTG AGTTATTTGA CACTACCGAG GAGCTACGAG TGTTGACGTG CGTCTATGGC
1321 GTTCGTCATG CTCGTGGATC GATCTCTTTA GTCTCTGCTC TAAGTGGCTT TTCTCCTGGA
1381 ACTTCTTCTT CGCCGTTCAC GCCTTACCTT ATGCACCTCA TACCGCTCCC GAAGAAGCGG
1441 AAAACTGAAT TGTTGTACCA CGAATTAGAC GAAGATGCAG GAAATTCCAA CGGCGGAGAC
1501 GATGAGTTCG GGACTAATGA AGGACTAGAG ATCAATGACT CGATCGATTC GTTTACTAGA
1561 GACAGAAAAA TAATGGTCCG GCAGGTGAAA CTTGTGGCGC CGATGGAGAA TATGCACGAA
1621 GAGATCTGTA ACGCCACTGA AGATCTTCGT GTATCGATCG TGTTTCTACC TTTCCATAAA
1681 CACCAGAGGA TCGACGGGAA AACCACGAAT GACGGGGAAG TTTTTCGACA TATGAACCGG
1741 AAGGTTCTAA AGCAAGCTCA ATGTTCGATT GGTATCTTTG TGGATAGAAA CATAACAGGG
1801 TTTCACCAGC TTCACGGGTC TGATTCGGTA CAACACGTTG CTGCATTGTT CTTCGGTGGT
1861 CCTGATGATC GTGAGGCTCT GTCCTTGTGC AAGTGGCTTA CCAATAACTC TCAGATTCAC
1921 CTCACTGTCA TACAGTTTGT GGCGGATGAC TCAAAGACAG AGAAAATTGT CGGAGACGCG
1981 GTGACCAAGG AAAACAACGA AGTATTCTTG GAGATTGTTA GTGAAGATCA AACCGAAAAC
2041 GAAACAGATC GAATCTTCTT AGAAGAATTC TATCACAGAT TTGTGACGAC GGGGCAAGTT
2101 GGATTCATAG AGAAGCGAGT GAGCAACGGA ATGCAGACGC TGACAATTCT AAGAGAGATC
2161 GGGGAGATGT ATTCACTGTT TGTGGTAGGA AAAAACAGAG GAGATTGTCC AATGACTTCA
2221 GGAATGAATG ATTGGGAAGA GTGTCCGGAA TTAGGAACGG TCGGAGATTT CTTGGCTTCA
2281 TCAAATATGG ATGTAAATGC TTCTGTATTA GTAGTTCAAA GACATAGAAA CTCATTTGAT
2341 AGCTTTGTAG ATGAATAG
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Protein Sequence (785 aa):
1 MDPKMLFCLP EGDALFNPLN TMFIQMACIL VFSQFFYLFL KPCGQAGPVA QILAGIVLSL
61 LTIIRKVHEF FLQKDSASYY IFFSFLLRTA FVFLIGLEID LDFMKRNLKN SIVITLGSLV
121 ISGIIWLPFL WFLIRFMQIK GDFLTFYLAF LITLSNTAAP VVIRSIIDWK LHTSEIGRLA
181 ISCGLFIEIT NIFIYTIVLS FISGTMTADI FIYSFATGVI ILTNRFLASW LPKRNPKEKY
241 LSKAETLAFI ILILIIALTI ESSNLNSTLF VFIIGLMFPR EGKTYRTLIQ RLSYPIHEFV
301 LPVYFGYIGF RFSVNSLTKR HYLVLGMTVA LSLLGKLLGV LFACSFLKIP KQYWLFLSTM
361 LSVKGHIGLV LLDSNLMYKK WFTPVVHDMF VAALVIMTLL SGVITSLLLR SQEKSFAHIK
421 TSLELFDTTE ELRVLTCVYG VRHARGSISL VSALSGFSPG TSSSPFTPYL MHLIPLPKKR
481 KTELLYHELD EDAGNSNGGD DEFGTNEGLE INDSIDSFTR DRKIMVRQVK LVAPMENMHE
541 EICNATEDLR VSIVFLPFHK HQRIDGKTTN DGEVFRHMNR KVLKQAQCSI GIFVDRNITG
601 FHQLHGSDSV QHVAALFFGG PDDREALSLC KWLTNNSQIH LTVIQFVADD SKTEKIVGDA
661 VTKENNEVFL EIVSEDQTEN ETDRIFLEEF YHRFVTTGQV GFIEKRVSNG MQTLTILREI
721 GEMYSLFVVG KNRGDCPMTS GMNDWEECPE LGTVGDFLAS SNMDVNASVL VVQRHRNSFD
781 SFVDE
›› Fasta: All CHX Protein Sequences
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